Journal articles

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Mosayebi Samani, Mohsen; Jamil, Asif; Salvador, Ricardo; Ruffini, Giulio; Haueisen, Jens; Nitsche, Michael
The impact of individual electrical fields and anatomical factors on the neurophysiological outcomes of tDCS: a TMS-MEP and MRI study. - In: Brain stimulation, ISSN 1876-4754, Bd. 14 (2021), 2, S. 316-326

Background - Transcranial direct current stimulation (tDCS), a neuromodulatory non-invasive brain stimulation technique, has shown promising results in basic and clinical studies. The known interindividual variability of the effects, however, limits the efficacy of the technique. Recently we reported neurophysiological effects of tDCS applied over the primary motor cortex at the group level, based on data from twenty-nine participants who received 15min of either sham, 0.5, 1.0, 1.5 or 2.0 mA anodal, or cathodal tDCS. The neurophysiological effects were evaluated via changes in: 1) transcranial magnetic stimulation (TMS)-induced motor evoked potentials (MEP), and 2) cerebral blood flow (CBF) measured by functional magnetic resonance imaging (MRI) via arterial spin labeling (ASL). At the group level, dose-dependent effects of the intervention were obtained, which however displayed interindividual variability. - Method - In the present study, we investigated the cause of the observed inter-individual variability. To this end, for each participant, a MRI-based realistic head model was designed to 1) calculate anatomical factors and 2) simulate the tDCS- and TMS-induced electrical fields (EFs). We first investigated at the regional level which individual anatomical factors explained the simulated EFs (magnitude and normal component). Then, we explored which specific anatomical and/or EF factors predicted the neurophysiological outcomes of tDCS. - Results - The results highlight a significant negative correlation between regional electrode-to-cortex distance (rECD) as well as regional CSF (rCSF) thickness, and the individual EF characteristics. In addition, while both rCSF thickness and rECD anticorrelated with tDCS-induced physiological changes, EFs positively correlated with the effects. - Conclusion - These results provide novel insights into the dependency of the neuromodulatory effects of tDCS on individual physical factors.



https://doi.org/10.1016/j.brs.2021.01.016
Jaufenthaler, Aaron; Kornack, Thomas; Lebedev, Victor; Limes, Mark E.; Körber, Rainer; Liebl, Maik; Baumgarten, Daniel
Pulsed optically pumped magnetometers: addressing dead time and bandwidth for the unshielded magnetorelaxometry of magnetic nanoparticles. - In: Sensors, ISSN 1424-8220, Bd. 21 (2021), 4, 1212, insges. 19 S.

https://doi.org/10.3390/s21041212
Blum, Maren-Christina; Solf, Benjamin; Hunold, Alexander; Klee, Sascha
Effects of ocular direct current stimulation on full field electroretinogram. - In: Frontiers in neuroscience, ISSN 1662-453X, Bd. 15 (2021), 606557, S. 1-9

https://doi.org/10.3389/fnins.2021.606557
Gresing, Lennart J.; Radon, Patricia; Friedrich, Ralf P.; Zahn, Diana; Raasch, Martin; Mosig, Alexander S.; Dutz, Silvio; Alexiou, Christoph; Wiekhorst, Frank; Hochhaus, Andreas; Clement, Joachim H.
Negatively charged magnetic nanoparticles pass the blood-placenta barrier under continuous flow conditions in a time-dependent manner. - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Volume 521 (2021), part 2, 167535

The transfer of substances via the blood-placenta barrier is tightly regulated and critical for the fetus and the expecting mother. In case of necessary medical interventions during pregnancy a comprehensive knowledge about the interaction of the drugs with this barrier is indispensable. Therefore well-engineered test systems are needed and valuable transport systems are helpful. We developed an in vitro microfluidic blood-placenta barrier system consisting of the human trophoblast cell line BeWo and human primary placental pericytes. The integrity and stability of the model was verified by a permeability assay and immunocytochemistry. As potential drug carriers magnetic nanoparticles with various coatings were applied and their ability to pass the barrier was quantified by magnetic particle spectroscopy. We could demonstrate that up to 4% of negatively charged nanoparticles pass the barrier in a time-dependent manner.



https://doi.org/10.1016/j.jmmm.2020.167535
Seeland, Marco; Mäder, Patrick
Multi-view classification with convolutional neural networks. - In: PLOS ONE, ISSN 1932-6203, Bd. 16 (2021), 1, e0245230, insges. 17 S.

https://doi.org/10.1371/journal.pone.0245230
Dunker, Susanne; Motivans, Elena; Rakosy, Demetra; Boho, David; Mäder, Patrick; Hornick, Thomas; Knight, Tiffany M.
Pollen analysis using multispectral imaging flow cytometry and deep learning. - In: The new phytologist, ISSN 1469-8137, Bd. 229 (2021), 1, S. 593-606

Pollen identification and quantification are crucial but challenging tasks in addressing a variety of evolutionary and ecological questions (pollination, paleobotany), but also for other fields of research (e.g. allergology, honey analysis or forensics). Researchers are exploring alternative methods to automate these tasks but, for several reasons, manual microscopy is still the gold standard. In this study, we present a new method for pollen analysis using multispectral imaging flow cytometry in combination with deep learning. We demonstrate that our method allows fast measurement while delivering high accuracy pollen identification. A dataset of 426 876 images depicting pollen from 35 plant species was used to train a convolutional neural network classifier. We found the best-performing classifier to yield a species-averaged accuracy of 96%. Even species that are difficult to differentiate using microscopy could be clearly separated. Our approach also allows a detailed determination of morphological pollen traits, such as size, symmetry or structure. Our phylogenetic analyses suggest phylogenetic conservatism in some of these traits. Given a comprehensive pollen reference database, we provide a powerful tool to be used in any pollen study with a need for rapid and accurate species identification, pollen grain quantification and trait extraction of recent pollen.



https://doi.org/10.1111/nph.16882
Dutz, Silvio; Stang, Anton; Wöckel, Lucas; Kosch, Olaf; Vogel, Patrick; Behr, Volker Christian; Wiekhorst, Frank
A dynamic bolus phantom for the evaluation of the spatio-temporal resolution of MPI scanners. - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Bd. 519 (2021), 167446

Magnetic particle imaging (MPI) is a tomographic imaging method to determine the spatial distribution of magnetic nanoparticles (MNP) within a defined volume. To evaluate the spatio-temporal resolution of existing MPI scanners, enabling the consistent comparison of the performance of different scanner setups, we developed dynamic MPI measurement phantoms based on segmented flow. These segmented flow phantoms comprise a defined bolus of ferrofluid tracer material, which can be pumped through a tube system with defined velocities. Using a hydrophobic organic carrier oil, cylindrically shaped boluses of different diameter, length, and flow velocity can be emulated. Moving boluses were imaged by different MPI scanner types and the correlation of spatial resolution und velocity of the bolus was investigated. For all bolus dimension and flow velocity combinations investigated, we observed a decreasing spatial resolution and increasing blurring for increasing bolus velocity and decreasing bolus volume.



https://doi.org/10.1016/j.jmmm.2020.167446
Häfeli, Urs; Dutz, Silvio; Zborowski, Maciej; Schütt, Wolfgang
Preface magnetic carriers conference 2018. - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Bd. 494 (2020), 165748

https://doi.org/10.1016/j.jmmm.2019.165748
Boho, David; Rzanny, Michael Carsten; Wäldchen, Jana; Nitsche, Fabian; Deggelmann, Alice; Wittich, Hans Christian; Seeland, Marco; Mäder, Patrick
Flora Capture: a citizen science application for collecting structured plant observations. - In: BMC bioinformatics, ISSN 1471-2105, Bd. 21 (2020), 576, insges. 11 S.

Digital plant images are becoming increasingly important. First, given a large number of images deep learning algorithms can be trained to automatically identify plants. Second, structured image-based observations provide information about plant morphological characteristics. Finally in the course of digitalization, digital plant collections receive more and more interest in schools and universities.



https://doi.org/10.1186/s12859-020-03920-9
Warsito, Indhika Fauzhan; Hunold, Alexander; Haueisen, Jens; Supriyanto, Eko
Performance evaluation of capacitive based force sensor for electroencephalography head caps. - In: International journal on robotics, automation and sciences, ISSN 2682-860X, Bd. 2 (2020), S. 4-8

https://doi.org/10.33093/ijoras.2020.2.1