Journal articles

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Nagel, Edgar; Dietzel, Alexander; Link, Dietmar; Haueisen, Jens; Klee, Sascha
Progrediente pigmentierte Fundusläsion nach 23 Jahren - therapieren oder beobachten?. - In: Die Ophthalmologie, ISSN 2731-7218, Bd. 120 (2023), 8, S. 851-856

https://doi.org/10.1007/s00347-022-01729-w
Weise, Konstantin; Numssen, Ole; Kalloch, Benjamin; Zier, Anna Leah; Thielscher, Axel; Haueisen, Jens; Hartwigsen, Gesa; Knösche, Thomas R.
Precise motor mapping with transcranial magnetic stimulation. - In: Nature protocols, ISSN 1750-2799, Bd. 18 (2023), S. 293-318

We describe a routine to precisely localize cortical muscle representations within the primary motor cortex with transcranial magnetic stimulation (TMS) based on the functional relation between induced electric fields at the cortical level and peripheral muscle activation (motor-evoked potentials; MEPs). Besides providing insights into structure-function relationships, this routine lays the foundation for TMS dosing metrics based on subject-specific cortical electric field thresholds. MEPs for different coil positions and orientations are combined with electric field modeling, exploiting the causal nature of neuronal activation to pinpoint the cortical origin of the MEPs. This involves constructing an individual head model using magnetic resonance imaging, recording MEPs via electromyography during TMS and computing the induced electric fields with numerical modeling. The cortical muscle representations are determined by relating the TMS-induced electric fields to the MEP amplitudes. Subsequently, the coil position to optimally stimulate the origin of the identified cortical MEP can be determined by numerical modeling. The protocol requires 2 h of manual preparation, 10 h for the automated head model construction, one TMS session lasting 2 h, 12 h of computational postprocessing and an optional second TMS session lasting 30 min. A basic level of computer science expertise and standard TMS neuronavigation equipment suffices to perform the protocol.



https://doi.org/10.1038/s41596-022-00776-6
Hahn, Gerald; Kumar, Arvind; Schmidt, Helmut; Knösche, Thomas R.; Deco, Gustavo
Rate and oscillatory switching dynamics of a multilayer visual microcircuit model. - In: eLife, ISSN 2050-084X, Bd. 11 (2022), e77594, S. 1-28, insges. 28 S.

The neocortex is organized around layered microcircuits consisting of a variety of excitatory and inhibitory neuronal types which perform rate- and oscillation-based computations. Using modeling, we show that both superficial and deep layers of the primary mouse visual cortex implement two ultrasensitive and bistable switches built on mutual inhibitory connectivity motives between somatostatin, parvalbumin, and vasoactive intestinal polypeptide cells. The switches toggle pyramidal neurons between high and low firing rate states that are synchronized across layers through translaminar connectivity. Moreover, inhibited and disinhibited states are characterized by low- and high-frequency oscillations, respectively, with layer-specific differences in frequency and power which show asymmetric changes during state transitions. These findings are consistent with a number of experimental observations and embed firing rate together with oscillatory changes within a switch interpretation of the microcircuit.



https://doi.org/10.7554/eLife.77594
Voss, Andreas; Bogdanski, Martin; Walther, Mario; Langohr, Bernd; Albrecht, Reyk; Seifert, Georg; Sandbothe, Mike
Mindfulness-based student training improves vascular variability associated with sustained reductions in physiological stress response. - In: Frontiers in Public Health, ISSN 2296-2565, Bd. 10 (2022), 863671, S. 1-16

In today's fast-paced society, chronic stress has become an increasing problem, as it can lead to psycho-physiological health problems. University students are also faced with stress due to the demands of many courses and exams. The positive effects of mindfulness-based stress reduction (MBSR) on stress management and self-regulation have already been studied. We have developed a new mindfulness intervention tailored for students-the Mindfulness-Based Student Training (MBST). In this study, we present longitudinal results of the MBST evaluation. Biosignal analysis methods, including pulse wave variability (PWV), heart rate variability, and respiratory activity, were used to assess participants' state of autonomic regulation during the 12-week intervention and at follow-up. The progress of the intervention group (IGR, N = 31) up to 3 months after the end of MBST was compared with that of a control group (CON, N = 34). In addition, the long-term effect for IGR up to 1 year after intervention was examined. The analysis showed significant positive changes in PWV exclusively for IGR. This positive effect, particularly on vascular function, persists 1 year after the end of MBST. These results suggest a physiologically reduced stress level in MBST participants and a beneficial preventive health care program for University students.



https://doi.org/10.3389/fpubh.2022.863671
Szturo, Karolina; Haueisen, Jens; Piatek, Lukasz
MSLO - melanocytic skin lesion ontology. - In: Digital medicine, ISSN 2226-8561, Bd. 8 (2022), 1, 29, S. 1-9

Background and Purpose: Malignant melanoma is a high-grade skin cancer with high feasibility to metastasize to both regional and distant sites when detected late. Therefore, it is crucial to diagnose this type of cancer at an early stage to ensure effective treatment. The identification of melanocytic lesions is a difficult issue, even for experienced experts. The current development of information technology, particularly related to image analysis and machine learning, is an opportunity to support the work of specialists and detect malignant melanoma more effectively. The aim of this work is to present a melanocytic skin lesion ontology (MLSO) structure, which serves as a basis for a melanoma diagnosis system and includes the formalization of the experts' and literature knowledge. Subjects and Methods: MLSO describes the most commonly used melanoma assessing strategies: Argenziano's (also known as the 7-point checklist), Menzies', and Stolz's (based on the ABCD rule) strategies as well as Chaos and Clues. Results: In this work, a case study was conducted on the description of a dermatoscopic digital image of a melanocytic skin nevus. The nevus was evaluated according to all of the strategies included in the MLSO, and inferences were made based on these strategies. The analyzed lesion was classified as a benign nevus since no malignancy was indicated by any of the applied strategies. Conclusion: Initial results indicate the usefulness of MLSO in diagnosing skin cancer. A significant advantage of MLSO is that it provides results obtained using four strategies. Therefore, the results are more objective and the possible errors may be avoided. The MLSO structure is still developing and will be implemented into an automated skin cancer diagnosis system.



https://doi.org/10.4103/digm.digm_18_22
Dutz, Silvio; Häfeli, Urs; Gutierrez, Lucia; Zborowski, Maciej; Schütt, Wolfgang
Preface to the special issue “Scientific and Clinical Applications of Magnetic Carriers 2022”. - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Bd. 564 (2022), 2, 170205

https://doi.org/10.1016/j.jmmm.2022.170205
Korobkov, Alexey Alexandrovich; Diugurova, Marina Konstantinovna; Haueisen, Jens; Haardt, Martin
Robust multi-dimensional model order estimation using LineAr Regression of Global Eigenvalues (LaRGE). - In: IEEE transactions on signal processing, ISSN 1941-0476, Bd. 70 (2022), S. 5751-5764

The efficient estimation of an approximate model order is very important for real applications with multi-dimensional low-rank data that may be corrupted by additive noise. In this paper, we present a novel robust to noise method for model order estimation of noise-corrupted multi-dimensional low-rank data based on the LineAr Regression of Global Eigenvalues (LaRGE). The LaRGE method uses the multi-linear singular values obtained from the HOSVD of the measurement tensor to construct global eigenvalues. In contrast to the Modified Exponential Test (EFT) that also exploits the approximate exponential profile of the noise eigenvalues, LaRGE does not require the calculation of the probability of false alarm. Moreover, LaRGE achieves a significantly improved performance in comparison with popular state-of-the-art methods. It is well suited for the analysis of noisy multidimensional low-rank data including biomedical signals. The excellent performance of the LaRGE method is illustrated via simulations and results obtained from EEG recordings.



https://doi.org/10.1109/TSP.2022.3222737
Ng, Chuen Rue; Fiedler, Patrique; Kuhlmann, Levin; Liley, David; Vasconcelos, Beatriz; Fonseca, Carlos; Tamburro, Gabriella; Comani, Silvia; Lui, Troby Ka-Yan; Tse, Chun-Yu; Warsito, Indhika Fauzhan; Supriyanto, Eko; Haueisen, Jens
Multi-center evaluation of gel-based and dry multipin EEG caps. - In: Sensors, ISSN 1424-8220, Bd. 22 (2022), 20, 8079, S. 1-16

Dry electrodes for electroencephalography (EEG) allow new fields of application, including telemedicine, mobile EEG, emergency EEG, and long-term repetitive measurements for research, neurofeedback, or brain–computer interfaces. Different dry electrode technologies have been proposed and validated in comparison to conventional gel-based electrodes. Most previous studies have been performed at a single center and by single operators. We conducted a multi-center and multi-operator study validating multipin dry electrodes to study the reproducibility and generalizability of their performance in different environments and for different operators. Moreover, we aimed to study the interrelation of operator experience, preparation time, and wearing comfort on the EEG signal quality. EEG acquisitions using dry and gel-based EEG caps were carried out in 6 different countries with 115 volunteers, recording electrode-skin impedances, resting state EEG and evoked activity. The dry cap showed average channel reliability of 81% but higher average impedances than the gel-based cap. However, the dry EEG caps required 62% less preparation time. No statistical differences were observed between the gel-based and dry EEG signal characteristics in all signal metrics. We conclude that the performance of the dry multipin electrodes is highly reproducible, whereas the primary influences on channel reliability and signal quality are operator skill and experience.



https://doi.org/10.3390/s22208079
Hammer, Martin; Simon, Rowena; Meller, Daniel; Klemm, Matthias
Combining fluorescence lifetime with spectral information in fluorescence lifetime imaging ophthalmoscopy (FLIO). - In: Biomedical optics express, ISSN 2156-7085, Bd. 13 (2022), 10, S. 5483-5494

Fluorescence lifetime imaging ophthalmoscopy (FLIO) provides information on fluorescence lifetimes in two spectral channels as well as the peak emission wavelength (PEW) of the fluorescence. Here, we combine these measures in an integral three-dimensional lifetime-PEW metric vector and determine a normal range for this vector from measurements in young healthy subjects. While for these control subjects 97 (±8) % (median (interquartile range)) of all para-macular pixels were covered by this normal vector range, it was 67 (±55) % for the elderly healthy, 38 (±43) % for age-related macular degeneration (AMD)-suspect subjects, and only 6 (±4) % for AMD patients. The vectors were significantly different for retinal pigment epithelium (RPE) lesions in AMD patients from that of non-affected tissue (p < 0.001). Lifetime- PEW plots allowed to identify possibly pathologic fundus areas by fluorescence parameters outside a 95% quantile per subject. In a patient follow-up, changes in fluorescence parameters could be traced in the lifetime-PEW metric, showing their change over disease progression.



https://doi.org/10.1364/BOE.457946
Petkoviâc, Bojana; Ziolkowski, Marek; Kutschka, Hermann; Töpfer, Hannes; Haueisen, Jens
Accuracy assessment of simplified computation of active and passive magnetic shielding for optically pumped magnetometers. - In: IEEE transactions on magnetics, ISSN 1941-0069, Bd. 58 (2022), 9, 7401204, insges. 4 S.

A low residual environmental magnetic field is required for the proper operation of most optically pumped magnetometers (OPMs). This is achieved using a combination of passive and active magnetic shielding. Passive magnetic shielding often uses multiple layers of highly permeable materials. A realistic two-layer magnetically shielded room (MSR) for biomagnetic measurements is numerically studied using the finite element method. A measured B-H characteristic of Mumetal is used, which is linearly extrapolated from the Rayleigh region (RR) into the low magnetic field range. This extension of the magnetization curve yields no significant differences compared to using a constant permeability value for the low magnetic field range. Furthermore, we model the MSR with only one shield and apply a simple analytical method of images (MOI). The MOI yields on average a 100-fold reduction in computation time. The relative difference of the magnetic flux density computed with MOI and finite element method (FEM) is smaller than < 1% at the center of a spherical region of interest (ROI) with a radius of 0.3 m desired from the point of magnetoencephalography (MEG) using OPMs. The achieved accuracy of the MOI makes it suitable for the optimization of active shielding coils.



https://doi.org/10.1109/TMAG.2022.3161736